Browse Plugins

Name Description Author Category Runtime Version Actions
DIA-NN to CurtainPTM Converter Convert DIA-NN PTM differential analysis output to CurtainPTM upload format. Processes modified seq… CauldronGO Team utilities python 1.0.0 View
Spectronaut to CurtainPTM Converter Convert Spectronaut PTM output to CurtainPTM upload format. Supports multiple processing modes for … CauldronGO Team utilities python 1.0.0 View
Peptide Library Check Check if peptides from experimental data are present in a FASTA library by generating tryptic pepti… Cauldron Team utilities python 1.0.0 View
Dose-Response Analysis Fit dose-response curves and calculate IC50 values for compound screening data CauldronGO Team analysis python 1.0.1 View
ConSurf Conservation Analysis Protein sequence conservation analysis using ConSurf standalone. Identifies conserved and variable … Toan Phung analysis docker 1.0.0 View
Export ASAP Exports ASAP files from an SDRF file. utilities python 1.0.0 View
Proteomic Ruler Estimate protein copy numbers and concentrations from deep profile mass spectrometry experiments us… Toan Phung analysis python 0.1.0 View
MSFragger to CurtainPTM Converter Convert MSFragger PTM single site output to CurtainPTM upload format. Extracts PTM positions from i… CauldronGO Team utilities python 1.0.0 View
PTM Position Remapping Remap PTM positions from peptides to protein sequences using UniProt data Cauldron Team utilities python 1.0.0 View
Proteomics MultiQC Report Generate comprehensive quality control reports for mass spectrometry proteomics data using pmultiqc… CauldronGO Team utilities python 1.0.0 View
PhosR MaxQuant TMT Analysis Comprehensive phosphoproteomic data analysis including normalization, differential analysis, kinase… CauldronGO Team statistics r 1.0.0 View
Protein Coverage Map Generate protein coverage maps from peptide data with intensity values Cauldron Team utilities python 1.0.0 View
Triqler Protein Quantification Protein quantification with integrated error propagation using Triqler. Propagates uncertainty from… CauldronGO Team statistics python 1.0.3 View